Nurturing Science

Posted by 8 de September de 2010

Coming back from vacations is never easy, and it is even worst in science. A lot of project proposals and articles to be written and conferences to be improved piled up in your laptop and you did not have the time to finnish even half of them. What is worst, that turn in your research you wanted time to think about didn’t come out as expected. Indeed, taking strong and deeply thought decisions is not an easy task while supervising your 6 to 11 years old kids in a rocky beach in the Costa Brava, climbing a Pyrenees mountain or enjoying a foam party in Vilamaniscle.

So fresh air is always welcome and I found it (as most good science) by chance at Uri Alon’s site. Afterwards (as happens also with most good science, unfortunately…) I realized his paper on “How to Choose a Good Scientific Problem” was extremely highly read. His “Materials for Nurturing Science” have started producing in me a similar effect as the reading of some Feynman’s lectures produced years ago, when a PhD student in Lluch’s and González-Lafont lab. Pessimistic views were (and periodically are) collapsing into what Alon refers as “the cloud”. But some readings and talks (veeeery few) lead us again to the right track, the one that was not initially drawn into our particular history. The wall, that I call sometimes (sorry, link in catalan). At any rate, spending some time having a look at Uri’s “Materials…” is an excellent therapy for the type of people that always reject any type of therapy: scientists…

Anyway, I think reading Uri’s paper and having some time to see his videos is an excellent start for any new PhD student or postdoctoral researcher in my lab, so here are the links for you, if you are thinking on spending the best years of your scientific career (and who knows if also of your life) at the CBBL.

Comment on “Statistical Analysis of Global Connectivity and Activity Distributions in Cellular Networks”

Posted by 2 de September de 2010

Aaron Clauset comments on the article in his blog. I am glad to see he shares our view but what he does not know (because the history of a paper is never clearly realized in its final published form) is that the article was send for the first time during the spring 2008. It’s been a looong way until somebody else realized the paper gave a comprehensive view of the (at that time!) current data and accepted the paper for publication. Are we facing some sectarism in science? I (naively) used to think NO, but sometimes one does not know what to believe…

[bibtex file=jordi.bib key=Garcia2010]

CBBL in the press

Posted by 22 de August de 2010

Is Spanish research mini-miracle going to pervade?

Posted by 14 de June de 2010

Science magazine has published an interesting report on the situation of science in Spain. Although somwhow too optimistic, if one takes into account an inner vision, it shows the potential of the country to make a quantum leap in the following years. The basis has been set up, and now we need two main ingredients to ensure continuity, two mechanisms that are not entirely ensured within the current financial crisis context:

  1. continuous funding, if not increasing
  2. leaders that look beyond their own “business”

The reason for the first is obvious. The connotation of the second is not so. In a country with little history in producing knowledge and in competing with the world for a position among leading nations, little minded leaders, at all levels of organization, are the main dangers for the system to progress. The temptation to utilize the circumstancial power in the own benefit while sending messages of excellence is part of the Spanish culture, and those who are in the research field in Spain can give several examples in all our organizations. This is easy to cure, and there is only need fro decency and for clear regulations that favor such excellence with the most extreme transparency. Whatever is different than that is just yet another failed attempt to bring the country near the top, where it should be by its potential.

Screenshots of Activ8

Posted by 7 de June de 2010

Selected screenshots from the Activ8 portal, showing 3D biological environments relating to respiratory anatomy and cystic fibrosis.

From left to right: Research Environment, Research Tools, Cystic Fibrosis Pathway, Avatar, Organs, Lungs, Bronchiole wall and mucus, Alveolus, Cell, Membrane, Nucleus, Chromosomes, Chromosome 7.

Science, Language and Literacy

Posted by 3 de May de 2010

“Argument and debate are common in science, yet they are virtually absent from science education. Recent research shows, however, that opportunities for students to engage in collaborative discourse and argumentation offer a means of enhancing student conceptual understanding and students’ skills and capabilities with scientific reasoning. As one of the hallmarks of the scientist is critical, rational skepticism, the lack of opportunities to develop the ability to reason and argue scientifically would appear to be a significant weakness in contemporary educational practice. In short, knowing what is wrong matters as much as knowing what is right. This paper presents a summary of the main features of this body of research and discusses its implications for the teaching and learning of science.”
Jonathan Osborne

These are words taken from the abstract of one of the articles devoted to Science, Language and Literacy in the special issue of Science Magazine. An unavoidable reading for all those engaged on teaching science, but not just that…

Design and Management of Research Projects 2010

Posted by 19 de April de 2010

Proper project design, management and exploitation are key recipes for success in both science and business. Learning from strategies in the latter environment we can give us new visions on how to propose succesful research projects. This, eventually, will lead to better technology transfer and to a real improve on the society perception of science and on its impact in daily life economy. Within the framework of the MSc on Bioinformatics for Health Sciences we thought, some years ago, that adding a course on project management would be an excellent training for our students, with the perspective to make them aware of the role the society expects researchers to take, beyond the (extremely needed) basic science knowledge.

As the course has a wider scope than just for MSc students, we decided to propose the course as an external activity in which the MSc students are invited to attend.

The new 2010 edition of the course is organized by the GRIB, and it is available for registration and, following the experience of previous years is, doubtless, worth reserving some hours in our busy agenda to attend this extremely interesting and practical course.